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multi-threading with PERL
Multi-threading, forking… At first, it seems to be complicated… Actually, it can be quite simple ! First, one thing you should now: your PERL installation may not support threads (this option has been...
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MacOS X 10.6.x, FINK, Macport, DBD::mysql and PERL…
Recently, I updated my laptop to snow leopard. After installing a bunch of softwares, I made some test with PERL… And then, with a PERL program working with a SQL database : dyld: lazy symbol binding...
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Manage your biblio: Papers for mac
I already had a licence of Endnote X2 on my computer, mostly to insert citations in word. In my opinion, Endnote is not a good software: it’s slow, heavy and not appropriate to manage your...
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AnnotQTL website has been released!
Recently, we have released a new website: AnnotQTL, a web tool designed to gather the functional annotation of different prominent website though limiting the redundancy of information. The last steps...
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Code more shell scripts (Part. I)
I’ve noticed, that I didn’t code a lot using shell language: very few sh scripts (for multiple commands executions), only basic commands. It’s a mistake, since for file management (for instance), shell...
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AnnotQTL accepted for publication in the NAR 2011 webserver edition
NAR just have let us know that our manuscript of AnnotQTL has been accepted for publication. The manuscript will be online in 2-3 weeks! In addition to the first release of AnnotQTL, we have added...
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DGD website released!
The Duplicated Gene Database website has been released! This database provides a simple way to quickly and easily select groups of tandem duplicate or large groups of multigene family by gene...
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DGD accepted for publication in PLOS ONE
The paper describing the construction and the content of this database had been accepted for publication and the article is now available on the PLOS ONE website. We improved the first release by...
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Code more shell scripts (Part. II)
With NGS data, we are experiencing to handle very (very very) large datasets. Whatever the coding language used (PERL, python, C…), the open/read part of a program is (always) very slow. Thus, the...
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